Best Accounting Software
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Our 10 Picks for the Best Accounting Software in Malaysia

Having good accounting software to support your business is always a good idea. Fortunately for you, we’ve collected a list of the best accounting software in Malaysia in this article! Accounting software allows you as a business owner to save all your financial information efficiently, file in-depth financial reports, improve data, and have a hi-tech way to keep your records. To better assist you with your business’s needs, below is a list of the best accounting software in Malaysia.

1. AutoCount Cloud Accounting

autocount cloud accounting logo
BEST FOR  SME Businesses, Accountants & Bookkeeper in Malaysia
PRODUCTS https://www.autocountsoft.com/pro-cloud-acc.html

Other products:
On-premise Accounting Solution (AutoCount Accounting)
Cloud-based HRMS Solution (AutoCount HRMS)
On-premise POS Solution (AutoCount POS)
Cloud-based POS and Marketplace Solution (AutoCount OneSales)
WEBSITEhttps://www.autocountsoft.com
ADDRESSB2-3A-01, Level 3A, Block B2, Meritus @ Oasis Corporate Park, No. 2, Jalan PJU 1A/2, Ara Damansara, 47301, Petaling Jaya, Selangor, Malaysia
CONTACT DETAILS+603-3000 3000
Whatsapp Contact
OPERATING HOURSMonday – Friday, 9:00 AM – 6:00 PM

AutoCount Cloud Accounting is one of the fastest-growing accounting software solutions in Malaysia, largely because it is designed with SME business owners in mind—especially those who struggle with complex, traditional accounting tools. Its user-friendly interface, keyword search and stock item inquiry make it easy for even non-accounting users to pick up quickly.

To support daily operations, the software integrates practical tools like WhatsApp and email, allowing users to send quotations, invoices, and other documents directly from the system with just a few clicks. This seamless communication helps businesses respond to customers faster while keeping everything organised within one platform.

Built for simplicity and accessibility, AutoCount Cloud Accounting offers a clean layout and smooth navigation across any device with internet access. It includes complete standard documents—ranging from Purchase to Sales and Accounts to Inventory—making it especially convenient for SMEs that need an all-in-one cloud-based system.

The cloud-powered collaborative access is one of its biggest advantages, giving business owners real-time visibility into financial data without waiting on their accountants. Multiple users can work on the same files simultaneously, enabling live updates, real-time data entry, and up-to-the-minute financial reporting.

AutoCount Cloud Accounting is also fully LHDN e-Invoice compliant and SST compliant, addressing two of the biggest concerns for Malaysian businesses today. Its Intelligent Onboarding, Submission, and Update technology streamlines e-invoicing by automating large parts of the submission and generation process, reducing manual work and errors.

For those hesitant to switch immediately, AutoCount offers a free trial so users can test all cloud accounting features before committing to a plan. As an added bonus, learning support is extensive—AutoCount Academy provides structured online courses, while numerous tutorials and guides are available through their website and YouTube channel.

Highlights

  • Access all accounting data and customizable reports from any device with an internet connection.
  • Includes complete standard documents, from Purchase to Sales and Accounts to Inventory.
  • Real-time dashboard for instant visibility into business performance.
  • Software auto-updates, ensuring you always use the latest features and improvements.
  • Always compliant with local requirements such as LHDN e-Invoice, SST, and more.
  • Reduces manual data entry with AI SmartScan, which extracts and fills in data from supplier invoices, bills and receipts.
  • Secured cloud environment powered by Huawei Cloud for enhanced data protection.
  • Highly collaborative system that allows multiple users to access and work simultaneously.
  • Saves costs by eliminating the need for server and storage hardware.

Customer Reviews

User Friendly

I have been using the auto count cloud for 4 months and I found that the features are very user friendly. Using the cloud version make it easier to access my accounting record anywhere and also i don’t have to worry losing the data and I don’t have to manually back-up my accounting record as it has been taken care of by auto count cloud.” – Nora Kifli

Friendly Support Team

“First time trying this accounting software, and it is really useful. We love the easy to use, simple layout, and most important, the friendly support team. I urge everyone give them a try and is cloud based accounting software”. – Wild Rhibik

2. SQL Accounting HQ

sql accounting g logo
BEST FOR:SMEs and growing businesses that need a flexible, scalable accounting system with workflow customization, strong data privacy, and cloud access on web and mobile.
PRODUCTS:SQL Account, SQL Payroll, SQL Cloud, SQL Mobile Sales, SQL HRMS, SQL Vision, SQL Accountant Set, SQL EBI Wellness POS, SQL POS – Retail, SQL BI Dashboard, SQL Production, SQL Stock Take, SQL Fixed Asset, SQL E Commerce, SQL Customizable

https://SQL.com.my/accounting-software/
WEBSITE:https://sql.com.my/ 
ADDRESS:1, Jln Setia Dagang AK U13/AK, Setia Alam, 40170 Shah Alam, Selangor, Malaysia
CONTACT DETAILS:+603 7890 1299 (Sales)
+603 7890 1300 (Support)
+603 7890 5577 (Support)
sales@sql.com.my 
OPERATING HOURS:Monday –  Friday 9 AM – 6 PM
Saturday 9 AM – 1 PM

SQL Accounting is one of Malaysia’s most trusted and widely adopted accounting solutions, developed locally by E Stream MSC and trusted by over 320,000 businesses nationwide. It offers a comprehensive suite of modules—including GL, AR/AP, Sales, Purchases, Inventory, and even Production—while maintaining affordability and flexibility, making it suitable for businesses of all sizes across various industries.

The software is available in Public Cloud, Desktop, and Hybrid Private Cloud (one-time payment), with strong multi-user access control to protect sensitive financial data.

SQL Accounting is fully compliant with Malaysia’s LHDN e-Invoice requirements. It integrates directly with the LHDN MyInvois portal for TIN and business registration retrieval. The availability of an e-Invoice sandbox environment further supports businesses in practising and understanding the e-Invoice process before going live.

SQL also ensures SST compliance with features such as pre-configured tax codes for Sales and Service Tax, automated tax calculations, and generating SST-02 forms. It also supports production-related SST exemption reporting by linking tax data with operational workflows.

To enhance user experience, SQL recently introduced a 24/7 AI Chatbot for instant support and SQL AI Easy Scan, an OCR-powered WhatsApp tool that extracts document details and auto-fills data—reducing manual entry and improving accuracy.

Additional automation tools include automated bank reconciliation, CTOS credit checks, SQL Mobile Sales, mobile-based Stock Take App, Assets, and a Consignment/Branches module for accurate outlet tracking. SQL also connects seamlessly with online sales platforms like Shopee, Lazada, and TikTok via SQL E-Commerce, synchronizing orders and inventory in real time.

With continuous feature updates, compliance enhancements, and free monthly online training, SQL Accounting remains a reliable and well-rounded choice for Malaysian businesses seeking an efficient accounting and e-Invoicing platform.

Highlights

  • Flexible deployment: Public Cloud, Desktop, and Hybrid Private Cloud (one-time payment)
  • Advanced report customization tailored to each business’s requirements
  • Fully compliant with Malaysia’s SST & LHDN e-Invoice regulations
  • 24/7 AI Chatbot support for instant assistance
  • SQL AI Easy Scan (via WhatsApp OCR) is used for bill scanning OCR for data extraction
  • Automation tools: CTOS credit checks, automated bank reconciliation
  • Mobile access via SQL Mobile Sales, allowing sales personnel to access pricing, check inventory status, and issue sales documents on the go
  • Mobile-based stock take app available
  • SQL Asset for managing fixed assets
  • Integrates with major online sales channels via SQL E-Commerce
  • SQL Consignment/Branches module for accurate consignment outlet tracking
  • Easy posting of SQL Payroll transactions into SQL Account
  • Free monthly online training and friendly ongoing support
  • Free trial version available

Customer Reviews

It’s been an excellent experience.

“I’ve been using SQL Accounting by eStream, and it’s been an excellent experience. The system is user-friendly, reliable, and packed with practical features that simplify daily accounting tasks. Reports generate quickly, and data accuracy is impressive. Plus, the eStream support team is responsive and professional, always ready to assist whenever I face technical issues. Highly recommended!” – Ying Jie Chan

I’m very satisfied and would highly recommend SQL Accounting

“Using SQL Accounting has been a very positive experience. The software is powerful, reliable, and user-friendly, making daily accounting tasks so much easier and more efficient. It offers great flexibility and useful features that meet business needs perfectly. I’m especially impressed by how smooth and intuitive the system is, it really helps save time and reduce errors. Overall, I’m very satisfied and would highly recommend SQL Accounting to any company looking for a professional accounting solution.” – Jun Wen Phook

3. InfoTech Cloud Accounting

info-tech-cloud-accounting
BEST FOR  SME Businesses, Accountants & Bookkeeper in Malaysia
PRODUCTS Accounting Software
HRMS Software
Mobile Attendance
Time Attendance Software
Payroll Software
Leave Management Software
Claims Management Software
Performance Appraisal Software
Project Cost Management Software
Biometric Fingerprint Readers
Door Access System
Payroll Outsourcing Services
WEBSITEhttps://www.info-tech.com.my/
ADDRESS#33A-1B, Menara Q Sentral, 2A Jalan Stesen Sentral 2, Kuala Lumpur Sentral, 50470 Kuala Lumpur, Malaysia

View other international locations
CONTACT DETAILSPhone: +603 2771 8388
Email: sales@info-tech.com.my
OPERATING HOURSMonday – Friday: 9:00 AM – 6 PM

Info-Tech is best known for its strong reputation in HR software, so we were curious to see whether its Cloud Accounting Software could meet the same standard. After testing it ourselves, we can confidently say that it does—and in many ways, it exceeds expectations.

The software offers all the essential accounting features businesses need, including Bank Reconciliation, Sales Analysis, Inventory Tracking, Multi-Currency Support, Customizable e-Invoicing-compliant invoices, and detailed financial reporting. Everything is presented in a clean, intuitive interface that makes bookkeeping straightforward even for non-accountants.

One of the standout advantages of Info-Tech’s cloud accounting software is its unlimited-user access. For a flat monthly rate, SMEs can add accountants, suppliers, vendors, or internal finance teams without paying extra, allowing for smoother collaboration and significant long-term cost savings. To top it off, inventory tracking comes included at no additional charge.

The mobile app is another major strength, giving users the ability to manage invoices, track transactions, and monitor financial performance on the go—true to their tagline, “Count On The Go.” This makes the software especially appealing to business owners who need real-time access to their financial data wherever they are.

Overall, our experience with Info-Tech Cloud Accounting was highly positive. The system is reliable, easy to implement, and packed with practical features that directly support daily accounting needs. For SMEs looking for a powerful, user-friendly, and cost-efficient accounting solution, Info-Tech Systems Integrators is a strong recommendation.

Highlights

  • Unlimited users at no extra cost
  • Seamless integration with Info-Tech HRMS
  • Real time dashboard
  • User-friendly mobile app
  • Top notch data security (ISO 27001, SS 584, Data Protection Trustmark (DPTM), Global Cyber Protection by CHUBB)
  • 1M+ App Downloads
  • 20,000 Customers

4. Zahir Accounting

zahir-accounting
BEST FOR  An award-winning accounting software
PRODUCTS https://zahiraccounting.com/en-my/#features
WEBSITEhttps://zahiraccounting.com/en-my/
ADDRESSMenara Arina Uniti Unit 11.09, Level 11 No. 97, Jalan Raja Muda Abdul Aziz, Federal Territory of Kuala Lumpur, Malaysia 50300 Kuala Lumpur, Malaysia
CONTACT DETAILSTel: +60 3-2202 7409
Email: malaysia@zahiraccounting.com
OPERATING HOURSMon to Fri: 9:00am-6:00pm

Zahir Accounting is an accounting software developer founded in 1996. It is run by a professional team made up of accountable programmers, a well-trained implementation team, and a dedicated customer staff. Strongly favored by businessmen, Zahir caters to people who are in need of accounting software that handles financial reports with great efficiency and speed. After-sales service is Zahir’s main concern, as they continue to improve their software by constantly updating it into even better versions. This makes their product one of the best accounting software in Malaysia.

Highlights

  • Amazing features
  • User-friendly
  • Over 70,000 users

5. QNE Software

qne-software
BEST FOR  The only accessible cloud accounting software via web, mobile, and Windows
PRODUCTS https://www.qne.com.my/qne-business-software/
WEBSITEhttps://www.qne.com.my/
ADDRESSSuite 25-3, Plaza Cheong Hin, Jalan SP 2/1, Section 2, Taman Serdang Perdana, 43300, Seri Kembangan, Selangor, 43300
CONTACT DETAILSTel: (603) 8943 3080 / (603) 8943 1080
Email: support@qne.com.my
OPERATING HOURSMon to Fri: 9:00am-5:00pm

QNE Software is a driven organization founded in 2001, offering an accounting system to the Southeast Asia market. Their methods include meeting the needs of local establishments and tough environments. The company is devoted to research and development, that is why QNE is able to offer clients new applications and features, to help them sustain their businesses. Consisting of a local team of professional and well-trained experts, QNE is able to work efficiently and answer to the needs of local business owners. This just proves that theirs is one of the best accounting software in Malaysia.

Highlights

  • QNE business
  • QNE inventory
  • QNE payroll

Customer Reviews

Customers of QNE Software stated that they have user-friendly and good services, recommending the company for their overall great solutions. They wrote their reviews online: “QNE SOFTWARE MALAYSIA have good accounting software especially their cloud environment which is user friendly, efficient and high accessibility” “The interface easy to use; user friendly and the agent provide good service.” “Have been using QNE for more than 10 years.Satisfied with your service and support. It’s an user friendly accounting software.”

6. Biztory

biztory-logo
BEST FOR  The best cloud accounting solution for your SME
PRODUCTS https://www.biztory.com.my/features/
WEBSITEhttps://www.biztory.com.my/
ADDRESSCO3 Social Office 2-3, Jalan Merbah 1, Bandar Puchong Jaya, 47170 Puchong, Selangor
CONTACT DETAILSEmail: ask@biztory.com.my
Tel: 012-3803369
OPERATING HOURSMon to Fri: 9:00am–6:00pm

Biztory is a cloud accounting software that offers a one-stop solution to businesses, in order to handle all their billing, accounting, and goods & services tax. Giving 30-day free trials and having an accessible, accountable, and affordable kind of service are just one of the things Biztory is known for. Biztory has over 6,557 registered companies using its software too. That tells you that this is one of the best accounting software in Malaysia.

Highlights

  • Personal and company tax submission
  • Audit package
  • 8 hours on-site accounting service

Customer Reviews

Biztory is praised for their good customer service and excellent cloud accounting system. People wrote their reviews on Google: “Good service! Always follow up after purchasing their software and they also provide demo.” “Good customer service, helps me to understand on how to use the software.”  

7. Data Tree Solutions

data-tree-solutions
BEST FOR   
PRODUCTS https://datatrees.com.my/#
WEBSITEhttps://datatrees.com.my/
ADDRESSB13-12A, Atria SOFO Suite, Jalan SS22/23, Damansara Jaya, 47400 Petaling Jaya, Selangor.
CONTACT DETAILSTel: 03-7499 4286
Jess: +6012 270 5238 (Whatsapp me)
Izzie: +6012 666 3192 (Whatsapp me)
Email: sales@datatrees.com.my
OPERATING HOURS 

Want to take your business to the next level? Consider Data Tree Solutions and their widely renowned business solutions that best caters to small and medium sized business. They have a small selection of software, all with its own specialities. Our personal favourite is their AutoCount software, your one-stop solution for most business related woes. The AutoCount Software offers accounting, payroll management, and even a POS System. If you’re hesitant about manning what seems to be a complex system, there’s no need to worry since Data Tree Solutions also offers consultation as well as training to better equip their clients.

Highlights

  • Training and Workshops
  • Consultations available
  • eCommerce solution

8. WTY Computerise Services

wty-computerise-services
BEST FOR  ABSS accounting software
PRODUCTS https://www.wtycs.com/solutions-and-services/
WEBSITEhttps://www.wtycs.com/
ADDRESS 63-01-1, Lorong Batu Nilam 4B, Bandar Bukit Tinggi, 41200, Klang, Selangor, Malaysia
CONTACT DETAILS+6 (016) 3230 383 ( Vincent Wong )
support@wtycs.com
OPERATING HOURS 

Next on our list is WTY Computerise Services, a company that understands how essential of a component accounting is to any business, may it be big or small. Hence, the need for accounting to be done correctly, and in a precise and efficient manner. This is why WTY Computerise Services has introduced ABSS Accounting Software to their clients. This is our top pick of accounting software simply because of how easy and accessible it is. You won’t have to worry about complexities because it’s beginner and user-friendly. Not only that, but WTY Computerise Services also offers training and support should you encounter any problems with the program itself.

Highlights

  • Premium support and service
  • Training available

9. Netiquette

netiquette-logo
BEST FOR  Cloud accounting software
PRODUCTS http://www.mynetiquette.com/index.html
WEBSITEhttp://www.mynetiquette.com/netiquette-ams.html
ADDRESSUnit 12-3A, Level 12, Tower A, Vertical Business Suite, Avenue 3, Bangsar South, No. 8, Jalan Kerinchi, 59200 Kuala Lumpur
CONTACT DETAILS1700 81 8010
enquiry@mynetiquette.com
OPERATING HOURS 

Netiquette’s Accounting Management Software is one of the best choices for SMEs. This is primarily because of the functions that the software has to offer, beginning with cloud-based and real time services so you can see everything being updated on the go. Aside from the efficiency that this clearly offers, the price point isn’t too bad either. It’s one of the most affordable in the fields, allowing startups and even niche markets to acquire the AMS to better their business. Lastly, the features that this software comes with. It’s GST compliant and has an Inventory Management System.

Highlights

  • Free 30 days trial account
  • Low operation cost
  • Subscription cost include phone, fax and email support

10. CALTRiX

caltrix-logo
BEST FOR  Xero Cloud Accounting Software
PRODUCTS E-Commerce services, F&B services, Service provider services
WEBSITEhttps://www.caltrix.asia/
ADDRESSC-3-33A, Block Camelia, 10 Boulevard, Lebuhraya Sprint, PJU 6A, 47400 Petaling Jaya, Selangor, Malaysia
CONTACT DETAILS+6013-725 3131 / connect@caltrix.asia
OPERATING HOURSMon to Fri: 9:30am-5:30pm

CALTRiX is a company that specializes in cloud accounting services and are experts in the implementation of Xero Cloud Accounting Software in particular. Based in Malaysia, they strive to deliver to clients innovative improvements and efficiency in all their business needs. They cater to all natures of businesses and are known to utilize the latest and most innovative software that will bring businesses to new heights. Their features are notable to enable real-time monitoring of businesses through even to smartphone devices. We recommend this company for business owners looking for an excellent cloud-based accounting automation system that can help them for their finance, IT, sales and administration needs for their growing business. With a solid core values tied to delivering only the best services, CALTRiX is driven to deliver dependable, transparent and excellent accounting services to each client they service.

Highlights

  • Innovative automation solutions
  • Utilizes the latest software
  • Strong core values

Having great accounting software definitely saves you and your business time. Try one of the ones we’ve recommended and you’ll see just how efficient the best accounting software in Malaysia can make your bookkeeping! When you’ve finally discovered the accounting software that works best for you, leave your comments down below and let us know how it went. We’d love to hear from you! Don’t stop there either! If you’re also looking for web hosting providers for your business’s website, try our list of the best web hostings in Malaysia.